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Lemon-Thyme Cupcakes With Honey Cream

5 from 2 votes
Christie MatherneBy Christie Matherne
Christie Matherne
Christie Matherne Food Editor

Christie is a curious lifelong writer and passionate home chef with a scientific approach to cooking. She specializes in Cajun food, but will cook just about anything, especially if it takes all day.

Expertise: Traditional Cajun foods, Indian, Italian, Tex-Mex and Mexican cuisines View all posts →
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These creative Lemon-Thyme Cupcakes With Honey Cream are as delicious as they are beautiful!

Delicious lemon blueberry muffins on a white plate with whipped cream and fresh lemons.

Cupcakes are my go-to dessert for a potluck gathering, birthday party, or game day celebration. It’s easy enough for me to whip up a quick pan of moist, flavorful mini-cakes and pipe frosting on top in decorative patterns. And the best part? With a pan of cupcakes, no one has to cut a cake into single servings!

I won’t lie, though—making the same cake recipe with “safe” flavors gets a little old after awhile. Ask anyone who knows me well, and they’ll tell you: I’ll start experimenting with flavors at some point. Cayenne pepper in chocolate frosting? Sure. Cinnamon on a pork loin? Yep. Thyme in a lemon cupcake? Absolutely.

These lemon-thyme cupcakes exist because of who I am as a person. I can’t just make the same thing over and over again! The bright zing of Meyer lemon zest and juice paired with the distinct herbal flavor of fresh thyme leaves is a combination that will keep my taste buds dancing for a while. So, make these the next time you have a party that needs a dessert, and share the amazing flavors with your friends!

Cream, eggs, baking powder, flour, vanilla extract, sugar, lemons, and milk for baking recipes.

Tips for making the best lemon thyme cupcakes

Cupcakes are fairly simple for bakers of most skill levels—including beginners! But there are a few things to be aware of in this recipe. Here are some tips to guide you in the right direction.

  • Keep your cream cold with cold equipment: When whipping the heavy cream, it helps to put your whisk and bowl (both preferably made of metal) in the freezer for a few minutes—especially if your kitchen runs warm or you live in a warm climate.
  • Use fresh thyme: Fresh thyme has a pop of flavor that is lost in the drying process, so be sure to use fresh leaves for this recipe!
  • Regular lemons may be used: If you can’t get your hands on Meyer lemons for this recipe, it’s okay. The primary difference between Meyer and regular lemons is that Meyer lemons will bring more sweetness and less acidity to the recipe than regular lemons, but you can use either variety here. If I were using regular lemons, I might add another teaspoon of sugar to the recipe, but if you don’t mind a more tart flavor, bake as directed in the recipe.

How do I store leftovers?

Fully-assembled with the honey cream, these cupcakes should be stored in the refrigerator in a covered container for up to 3 days. You can also freeze the cupcakes by flash-freezing them on a baking sheet until solid, then transferring them to a freezer bag or other freezer-safe container. Let them thaw in the fridge overnight before serving.

These will keep at room temperature (in a sealed container) for up to 3 days if you leave off the honey cream. You can also freeze the cupcakes without the cream by storing them in a freezer-safe bag for up to 3 months.

Lemon cupcakes with creamy frosting and fresh lemons on a white wooden table.

Serving suggestions

Serve these cupcakes at a dessert spread for a party or holiday meal, alongside other decadent treats such as these super-cute Pecan Brittle Baskets, a traditional Cherry Pie, and Almond-Amaretto Panna Cotta.

Lemon Whoopie Pies with Cream Filling on a beige plate, with fresh lemons and whipped cream in the background.
Delicious lemon blueberry muffins on a white plate with whipped cream and fresh lemons.

Lemon-Thyme Cupcakes With Honey Cream

Christie Matherne Profile PictureChristie Matherne
5 from 2 votes
Print Recipe Pin Recipe
Prep Time 20 minutes mins
Cook Time 22 minutes mins
Cooling Time 1 hour hr 5 minutes mins
Total Time 1 hour hr 47 minutes mins
Course Dessert
Cuisine American
Servings 12 cupcakes
Calories 385 kcal

Ingredients
  

  • 1 1/2 cups flour
  • 2/3 cup almond meal
  • 2 teaspoons baking powder
  • 1/2 teaspoon salt
  • 1 cup sugar
  • 3 eggs
  • 2 teaspoons Meyer lemon zest
  • 1/4 cup whole milk
  • 3/4 cup olive oil
  • 2 teaspoons fresh thyme leaves

Honey Cream:

  • 1 cup heavy whipping cream
  • 1 tablespoon Meyer lemon juice
  • 1/4 cup honey (use up to 1/2 cup, depending on how sweet you like it)
  • 1 teaspoon vanilla

Instructions
 

  • Preheat the oven to 350℉. Line a 12-muffin pan with paper liners. In a bowl, mix together flour, almond meal, baking powder, and salt. Set aside.
    Flour in a glass mixing bowl for baking recipes.
  • Add the sugar, eggs, and Meyer lemon zest to the bowl of an electric mixer. Beat on medium to medium-high speed until the mixture is pale and fluffy.
    Fluffy beaten eggs in a stand mixer for baking recipes.
  • Add the milk and olive oil to the mixer bowl and continue to mix.
    Rich, golden baking ingredients in a stand mixer for homemade baking recipes.
  • Add the flour mixture and thyme leaves, reserving a pinch of the leaves for decoration. Mix until just combined.
    Creamy batter being mixed with herbs in a stand mixer for baking recipes.
  • Fill each hole of the muffin pan about 2/3 of the way to the top. Sprinkle the tops with a few thyme leaves for decoration.
    Mini cupcake batter in a muffin tin ready to bake, fresh and delicious.
  • Bake in the preheated oven for 18 to 22 minutes. Let them cool in the pan for 5 minutes, then completely on a rack, approximately 1 hour.
    Light golden herb-infused cupcakes cooling on a wire rack, perfect for baking enthusiasts.

Make The Honey Cream:

  • Whip the heavy cream with a mixer until the cream begins to thicken. Add the Meyer lemon juice, honey (to taste), and vanilla. Continue to beat until soft peaks form.
    Lemon Whoopie Pies with Cream Filling on a beige plate, with fresh lemons and whipped cream in the background.
  • Cut the cupcakes in half horizontally, and fill them with the cream.
    Fluffy lemon shortcake cookies with creamy filling on a beige plate.

Nutrition

Calories: 385kcalCarbohydrates: 37gProtein: 5gFat: 25gSaturated Fat: 7gSodium: 192mgFiber: 1g
Keyword easy cupcake recipe, Easy summer dessert, fancy cupcakes, honey whipped cream, lemon dessert, lemon thyme cupcakes, Meyer lemon, olive oil baking, olive oil cupcakes, sweet and savory dessert, thyme-infused cupcakes
Tried this recipe?Let us know how it was!
Christie Matherne Profile Picture

About Christie Matherne

Christie is a curious lifelong writer and passionate home chef with a scientific approach to cooking. She specializes in Cajun food, but will cook just about anything, especially if it takes all day.

Reader Interactions

Published: Sep 14, 2024 | Updated: Feb 17, 2026
5 from 2 votes (2 ratings without comment)

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